Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7714g00001 ATGGCCGCACCTCAATCTCTCTCCCTCTCCAAACCCTCCCCTCTCTCTCCCCCTCTCACCACCACCCCCCGCTTCTTCTCAAAACCCTCTCTCCCTTCCTTCCTCTCCGACACCCCCACCCGAAAACCCCTTTTCATCACTTCCTCCAAAAACCCAATTTCCGACATCATCATCTCAAACAAACCCAAATCATCTTCTCAAAACGACGACGTTTTCATCAACGACGATAAGCCTCGTGAAGAGTGTGGCGTTGTTGGAATCTACGGCGACTCAGAAGCTTCACGGTTATGCTATTTAGCTCTCCATGCTCTCCAACACCGTGGTCAAGAAGGTGCTGGAATCGTCACCGTTAACAATAACGTTCTTCAATCCATCACCGGTGTCGGTCTCGTTTCCGATGTGTTTAACGAATCAAAGCTCGATCAGTTACCTGGAAATTTGGCTATTGGTCATGTTCGTTACTCTACTGCTGGACAATCCATGCTGAAAAATGTTCAACCTTTTGTTGCTGGGTATCGTTTTGGTTCTGTTGGGGTTGCTCATAATGGTAATTTGGTTAATTATCGTACTTTAAGAGCTAAATTAGAAGAAAAAGGTTCGATTTTTAATACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCTACTTCAAAGCATAGACCTTTTATTTTAAGAATTGTTGATGCATGTGAGAAGCTTGAAGGAGCTTATTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTTTGGGTTTAGGCCTTTGGTTATGGGTAGGAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGGGAAGTGTTCCCTGGTGAGGTTATTGTGGTTGATAATAATGGGATTCAATCGCTTTGTCTTATGTCTCATCCGCAGCCGAAGCAGTGTGTCTTTGAGCATGTTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTTTATGCATCGCGTAGTCGATTTGGGGAGATACTTGCTACTGAGAGTCCTGTTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTGGCTGCTCTTGGTTATGCTGCGAAAGCTGGTGTTCCTTTTCAGCAAGGGTTGATTAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCGTCTCAGAAAATTAGGGACTTTGGTGTCAAGTTGAAGCTTTCCCCGGTTCGTGCTGTACTCGAAGGTAAAAGGGTTGTTGTCGTTGATGATTCGATTGTGAGGGGAACAACATCATCTAAGATTGTGAGGTTGCTTAAAGAAGCAGGTGCTAAAGAAGTTCACATGAGAATTGCAAGTCCTCCGATTATCGGTTCTTGTTATTATGGTGTTGATACACCTAGCT 1414 0.4321 MAAPQSLSLSKPSPLSPPLTTTPRFFSKPSLPSFLSDTPTRKPLFITSSKNPISDIIISNKPKSSSQNDDVFINDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVIVVDNNGIQSLCLMSHPQPKQCVFEHVYFALPNSVVFGRSVYASRSRFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7714g00001 471 CDD GPATase_N 82 332 IPR035584 -
Trme7714g00001 471 NCBIfam amidophosphoribosyltransferase 82 471 IPR005854 GO:0004044|GO:0009113
Trme7714g00001 471 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 82 305 IPR029055 -
Trme7714g00001 471 SUPERFAMILY PRTase-like 317 470 IPR029057 -
Trme7714g00001 471 Pfam Glutamine amidotransferase domain 160 279 IPR017932 -
Trme7714g00001 471 Hamap Amidophosphoribosyltransferase [purF]. 81 471 IPR005854 GO:0004044|GO:0009113
Trme7714g00001 471 MobiDBLite consensus disorder prediction 1 34 - -
Trme7714g00001 471 Gene3D - 345 464 IPR029057 -
Trme7714g00001 471 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 82 301 IPR017932 -
Trme7714g00001 471 Pfam Phosphoribosyl transferase domain 356 451 IPR000836 -
Trme7714g00001 471 CDD PRTases_typeI 344 455 IPR000836 -
Trme7714g00001 471 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 80 471 - -
Trme7714g00001 471 PIRSF Pur1 78 471 IPR005854 GO:0004044|GO:0009113
Trme7714g00001 471 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 82 470 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7714g00001 Trme-Chr7714 459 1872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7714g00001 65 471 PRT Gene Family AT4G34740 87.500 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7714g00001 K00764 - gmx:100791919 775.393