Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77115g00001 ATGAGAGTGAATGTCATCAAAGATATAGCTAATGCTTTATGTTATATGCATCATGATTGCTCACCTTCAATTGTTCATCGTGATATATCCAGCAAAAATGTTGTTTTGGATTTGGAATTTGTAGCTCATGTCTCAGACTTCGGCACATCTAAGTTTCTTAATCCTGACTCATCCAATTGGACCAATTTTGTAGGCACATTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAATGCGATGTGTATAGTTTTGGAGTATTAACCTTAGAAATACTTTTTGGAAAGCACCCTGGAGATATTGTATCAACTTATTTGTATGGTGGTGTGTGCCAAACACCTGATGGTATGTCATTGATTGATAAGTTGGATCAACGTCTTTCTCATCCTACAAATGCTCTCATGAAAGAAGTGGTATCAATTATAAGGAGTGCAATTGCTTGCTTAACTGAAAGTCCACGTTCTCGCCCTACCATGGAGGAG 495 0.3778 MRVNVIKDIANALCYMHHDCSPSIVHRDISSKNVVLDLEFVAHVSDFGTSKFLNPDSSNWTNFVGTFGYAAPELAYTMEVNEKCDVYSFGVLTLEILFGKHPGDIVSTYLYGGVCQTPDGMSLIDKLDQRLSHPTNALMKEVVSIIRSAIACLTESPRSRPTMEE 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77115g00001 165 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme77115g00001 165 SMART serkin_6 2 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme77115g00001 165 PANTHER LEUCINE RICH REPEAT KINASE 2 2 165 - -
Trme77115g00001 165 Gene3D Transferase(Phosphotransferase) domain 1 1 165 - -
Trme77115g00001 165 ProSitePatterns Tyrosine protein kinases specific active-site signature. 24 36 IPR008266 GO:0004672|GO:0006468
Trme77115g00001 165 SUPERFAMILY Protein kinase-like (PK-like) 2 165 IPR011009 -
Trme77115g00001 165 Pfam Protein kinase domain 4 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77115g00001 Trme-Chr77115 104 702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77115g00001 2 165 Receptor kinase-like Gene Family AT5G65700 42.353 5.46e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme77115g00001 Pkinase 1.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77115g00001 - - tpra:123922968 270.781