Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77099g00001 ATGGCTTATCCACACCACATTCCAACCTCTAGGATGTCATCACCCCGTTTCGCCACAAACAGTGATGCCATTGAGGTGAGGCCTCAAACTCAATTCCCAATGATCAACGACCACTCTGAGCAACATTCAGGTTTTGAGCAATATTCCATCAAGAGGGCAAGAATGATTGGTAACAATCATTCCGATGCATTGCCATGCCCTCCTCCTATGGTGATGCAGCCTCCACCTCAATTGAACAGAGGAACTGGCCACATTTTCTACAAGACCCGCACTTGTACCAGGTTCACGTGCGGCAATTGTAGGAACGGTGACAATTGCAACTTTAGGAACTGGCCACATTTTCTACAAGACCAGCTTTTGTTGCTAGTTAGACCAAATAGCATTCCATGCCAGCTGATGGTTGGGTTCTTTGCATATGCAAAATCGCGTGAAATAACTGTCGACAAGAAAACGTTAGAAGGTAGAATGACCTCCTTTGTTTAA 483 0.4534 MAYPHHIPTSRMSSPRFATNSDAIEVRPQTQFPMINDHSEQHSGFEQYSIKRARMIGNNHSDALPCPPPMVMQPPPQLNRGTGHIFYKTRTCTRFTCGNCRNGDNCNFRNWPHFLQDQLLLLVRPNSIPCQLMVGFFAYAKSREITVDKKTLEGRMTSFV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77099g00001 160 ProSiteProfiles Zinc finger C3H1-type profile. 86 116 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77099g00001 Trme-Chr77099 92 574 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trme77099g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77099g00001 - - tpra:123881739 186.422