Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme77023g00001 ATGGGATACTTCATACCGAAAGACACACAAGTTTTTGTGAATACGTGGGCAATTGGAAGAGATCCAGATGCTTGGGATGAACCATTGGTTTTTAAACCCGAAAGGTTTTGTGATTGTGATAATAAGAGTTATAAGACTGATTATAAAGGACAACATTACGAGTTTATACCATTTGGAGCTGGAAGAAGAATGTGTGCGGGTGTGCCTTTGGCACATAGAATTCTTCACCTTGTTTTGGGATCTTTGCTTCATCGATTTGATTGGGAGCTTGATAGCAATGTTACACCTTTAACTATGGACATGAAAGATAACCTTGGTATAACCATGCGAAAGTTTGAACCATTGCTTGCTGTGCCCAAATTAGTTGTTGGTTCTTGA 378 0.3889 MGYFIPKDTQVFVNTWAIGRDPDAWDEPLVFKPERFCDCDNKSYKTDYKGQHYEFIPFGAGRRMCAGVPLAHRILHLVLGSLLHRFDWELDSNVTPLTMDMKDNLGITMRKFEPLLAVPKLVVGS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme77023g00001 125 SUPERFAMILY Cytochrome P450 2 118 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77023g00001 125 Gene3D Cytochrome P450 1 113 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77023g00001 125 Pfam Cytochrome P450 2 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77023g00001 125 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 58 67 IPR017972 GO:0005506|GO:0016705
Trme77023g00001 125 PRINTS E-class P450 group I signature 55 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77023g00001 125 PRINTS E-class P450 group I signature 14 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77023g00001 125 PRINTS E-class P450 group I signature 65 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme77023g00001 125 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme77023g00001 Trme-Chr77023 337 714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme77023g00001 3 119 Cytochrome P450 AT3G52970 54.237 3.09e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme77023g00001 K22983 - aip:107648218 223.016