Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76934g00001 ATGACTGACACTTTACCTACTTCTGATGCATTAAAGCTTGAAAACAAGCATTCAGCAGAGGAACAAGTAACCAAGGAAACGAGCACCGATGATGGGTCAGTTCCAATGGGAAGGGAATGTGTTCTGTTAACAGGTAGCTCAAAAAGGGGATTGCCTAATACTCCCGGCAGGTTGGAATTACTTAAAGATGGTCCCGGAAGAAAAGGTAGATCCAAAGTCAGTGGAAAAGATGTAGAAAATGGATCTGGGAAAAGGAGTGGCCCTCGAGATGGAAGCAAATCCAAGAAGAGAAGTGGTGAAAGGCAAGATGAGGGCTGCGAGGGCAATGGTTTTCCAGATCGGGATTTTGAGTATTATGTGAAAGTGATTAGATGGTTAGAGTGTGAAGGACACATTGAAAAGAACTTCAGACAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACNCCTGAAGAAATAAGGATTGTGAAAATATATGTAGATACATTTCATGAAGATCCGGCTTCTCTTGCTGAGCAACTTGTGGACACCTTCTCAGATTGTGTATCAAACAAGAGATCATCAG 565 0.4212 MTDTLPTSDALKLENKHSAEEQVTKETSTDDGSVPMGRECVLLTGSSKRGLPNTPGRLELLKDGPGRKGRSKVSGKDVENGSGKRSGPRDGSKSKKRSGERQDEGCEGNGFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPEEIRIVKIYVDTFHEDPASLAEQLVDTFSDCVSNKRSS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76934g00001 188 MobiDBLite consensus disorder prediction 61 108 - -
Trme76934g00001 188 MobiDBLite consensus disorder prediction 13 27 - -
Trme76934g00001 188 MobiDBLite consensus disorder prediction 1 108 - -
Trme76934g00001 188 PANTHER VIN3-LIKE PROTEIN 2-RELATED 13 188 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76934g00001 Trme-Chr76934 1 565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76934g00001 108 188 PHD Gene Family AT5G57380 61.728 2.37e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76934g00001 - - gmx:100819331 294.664