Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76896g00001 ATGGCAGGCAGGTACTACATAACAGAATATCTCGGTTCGGCTGCCTTTAGTAGGGTTGTTCAAGCTCACGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGCCTAGATGAAATCAAGCTTTTGAAACTGGTCAATAAGCACGACCCCGGAGATAAACACCACATATTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACCGAACTTCTGCGTGCAAATTTGTACGAATTTCAAAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTACATAGATTGCAG 339 0.3864 MAGRYYITEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLHRLQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76896g00001 113 ProSiteProfiles Protein kinase domain profile. 5 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme76896g00001 113 Gene3D Transferase(Phosphotransferase) domain 1 59 102 - -
Trme76896g00001 113 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Trme76896g00001 113 Pfam Protein kinase domain 7 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme76896g00001 113 Gene3D Phosphorylase Kinase; domain 1 2 86 - -
Trme76896g00001 113 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 112 - -
Trme76896g00001 113 FunFam Putative serine/threonine-protein kinase dyrk2 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76896g00001 Trme-Chr76896 226 725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76896g00001 3 102 EF-hand Containing Proteins AT5G22840 34.615 3.21e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Trme76896g00001 Pkinase 9.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76896g00001 - - gmx:100783988 224.172