Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme768816g00001 | ATCAGAGGCATTTTTGCAGAGTTGGCGGATCTGATTCGCCAAGATCTGGCATGGGATGCGGTTCCCGACAGTGGTGGACTTCACCCGATTACCCGTTACTTGATGAACTATCTCCGTGCTGCTAGTCGGTCACGGAAGACCCTGGAGCAAGTGTTTGATGAAGATTATGGGAATCCATTGAAGGAATATCCCAAAATTGAGGATAGAATGCATTGCTCTAATTCCTCCCTCTCAGTGCAGATGC | 244 | 0.4836 | IRGIFAELADLIRQDLAWDAVPDSGGLHPITRYLMNYLRAASRSRKTLEQVFDEDYGNPLKEYPKIEDRMHCSNSSLSVQM | 81 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme768816g00001 | 81 | SUPERFAMILY | Cullin repeat-like | 2 | 65 | IPR016159 | - | |
| Trme768816g00001 | 81 | Gene3D | Exocyst complex component Exo70 | 1 | 81 | - | - | |
| Trme768816g00001 | 81 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 1 | 80 | IPR004140 | GO:0000145|GO:0006887 | |
| Trme768816g00001 | 81 | Pfam | Exo70 exocyst complex subunit | 1 | 77 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme768816g00001 | Trme-Chr768816 | 1 | 244 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme768816g00001 | 1 | 62 | EXO70 exocyst subunit family | AT5G58430 | 70.968 | 3.43e-22 | 86.7 |