Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme768816g00001 ATCAGAGGCATTTTTGCAGAGTTGGCGGATCTGATTCGCCAAGATCTGGCATGGGATGCGGTTCCCGACAGTGGTGGACTTCACCCGATTACCCGTTACTTGATGAACTATCTCCGTGCTGCTAGTCGGTCACGGAAGACCCTGGAGCAAGTGTTTGATGAAGATTATGGGAATCCATTGAAGGAATATCCCAAAATTGAGGATAGAATGCATTGCTCTAATTCCTCCCTCTCAGTGCAGATGC 244 0.4836 IRGIFAELADLIRQDLAWDAVPDSGGLHPITRYLMNYLRAASRSRKTLEQVFDEDYGNPLKEYPKIEDRMHCSNSSLSVQM 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme768816g00001 81 SUPERFAMILY Cullin repeat-like 2 65 IPR016159 -
Trme768816g00001 81 Gene3D Exocyst complex component Exo70 1 81 - -
Trme768816g00001 81 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 80 IPR004140 GO:0000145|GO:0006887
Trme768816g00001 81 Pfam Exo70 exocyst complex subunit 1 77 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme768816g00001 Trme-Chr768816 1 244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme768816g00001 1 62 EXO70 exocyst subunit family AT5G58430 70.968 3.43e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme768816g00001 K07195 - tpra:123923139 156.377