Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76830g00001 ATGTGTGTGCGCGTCTTACTTTTGTATTTTGTTATAGATAATGCAACTTGTGGTAAAACAACTTATGTTCACTGTAAAGCTGGGAGGGGGAGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAATACAAGCACATGACACCTGCTGCTGCCCTGGATTATGTGCGGTCTCGAAGACCTAGAGTGCTACTGGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCAAAGACCTGTTCAAAACTATAACAAGCAAATATCTGTTCAAAACTATAACAAGCAAAGACCTTGTTCTTTACCATACTCTCCCTCTGGGGACACAGTTCTCATAACCAAAGATGATCTTGAAGGCTATCATAGCACATCTGATACTAGTATGGAGCTGGCTATTGTTCCTAAAGTGGCAAAGACTAAGCCCATGATAGCAAGACTATCTTGCCTATTCGCATCCTTAAAGGTATCCGGTAGTAGTGTACCAATGACAAGGCGGCTGCCAGTTTCAGAGTCACGTGCTTGTTAA 525 0.4229 MCVRVLLLYFVIDNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALDYVRSRRPRVLLAPSQWKAVQNYNKQRPVQNYNKQISVQNYNKQRPCSLPYSPSGDTVLITKDDLEGYHSTSDTSMELAIVPKVAKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76830g00001 174 ProSitePatterns Tyrosine specific protein phosphatases active site. 23 33 IPR016130 GO:0016311|GO:0016791
Trme76830g00001 174 Pfam Dual specificity phosphatase, catalytic domain 11 77 IPR000340 GO:0008138|GO:0016311
Trme76830g00001 174 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 18 70 IPR000387 GO:0016311|GO:0016791
Trme76830g00001 174 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 77 IPR029021 -
Trme76830g00001 174 FunFam Protein-tyrosine phosphatase 4 89 - -
Trme76830g00001 174 Gene3D Protein tyrosine phosphatase superfamily 6 83 IPR029021 -
Trme76830g00001 174 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 10 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76830g00001 10 162 Protein tyrosine phosphatase (PTP) family AT2G35680 41.341 3.66e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76830g00001 - - vvo:131603803 280.796