Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme767g00001 ATGGTGAGTGTCCTGACTGATTTGACGAAACAATGTGTGGAGAAATTGATAAATGGGGCAATAACAGAAGCACGTCATGTATTTTGTTTCACATGCATTACTAAAGAATTTGAAGAAGAAAGGGCTAGGTTGGAAGCAGAAAGGATAACTTTGGGCCAACGTGCCAAAGTAGCAATAGGAAGAGATAAAGATATTCAAGCTAATGTTTGTTTGTGGGAAGAGGAAGCTGATAAGCTCATTCAAGAGGACACCAAAACAAAACAAACTTGTCTTTTTGGATTTTGTCCTAATTGCATATGGCGATATAAAAGGGGAAAGGAATTGGCAAATAACTTGGAAGAGGTTAAACGACTATTTGAAAAGGGTGAAAAACTTGAAAATATTGAACTCCCTCGTCGTCTTCCAGATGTTGAACGTTATTCATCCCAAAATTACATTTCTTTCAAAAGCAGAGAGTTAAAATACAAAGAATTGTTTGATGCACTAAAAGATGACAACAGCTATATAATCGGATTGCAAGGGATGGGTGGCACCGGGAAAACTACAATGGCTAAAGAAGTGGGTAAAGACCTAAAACAGTCAAAACAGTTTGATTATGTCATTGATACAACAATATCATCTACTCCTAATATAACAAAAATTCAAGACGATATTGCTGGACCTTTAGGATTGAAATGGGAGGATTGTAATGAATCAGACCGACCCAAAAGACTATGGAGCAGATTAACAAATGGTGATAAAATTCTACTGATAATGGATGATGTGTGGGATCGAGACCCAGCTCTTGATTTTGATGCAATAGGGATTCCCAAACAGGACAATCACAAAGGTTGCAGAGTTCTTGTAACCTCACGGAGTAAACAGATATTCAACAAAATGGATTGTGATAAGATAATTGAAGTGGATCTTTTATCCGAAGAAGATGCATGGATCATGTTCAAAAGGTATGCCAATATATGCAATAGCTCCTCCAAAAAGTTGATCAGTAAAGGGCGTAAAATTGTAAAGGAATGCAAACAATTACCAGTTGCAATTGCAGTTATCGCCAGCAGTTTAAAGGGCCAACAACATCGAGAGCATGAGTGGGATGTAACATTGAAATCCTTGAAGAAGCCTGCATCGATGCATGGTATCGATGATGATATGGTTGGAATTTATAAATGTCTGAAGCTTAGCTATGATTATATGAAGGATGAAAAGGCTAAGGGATTGTTCCTCTTATGTTCTGTATTCCGAGAAGATCAAGAAATTTCTATTGAAGTTCTAACCAGACTTTGCATCGGAGCGGGTGTTTTTGGAGAAGGTTATGGCAACTACGATGATGCTCGAAACCAAGTAATTGTAGCCAAAAACAAACTCTTGGATTCTTGTTTGTTGTTGGAGGTCAGTGAAGAACGGGTAAAAATGCATGATTTTGTTCGTGATGTGGCTCAATGGATAGCAAACAAAGAGATTCGAGGTGTAAATTTGTCTGACAAAAATCAGAAGTCATTGATCGAAAAGGAGACAAATATTAGATATTTATTATGTGAAGGGAAGAATAAGGATTTGTTCTCCTGGAAATTTGATGGTTCCAAACTTGAGACTCTTATTGTCCATGTGGATAGAGATGAAGGCCGCAGATTAATGGAAGTCCCAAATTCTTTCTTGGAAAATGTTATGAAGCTTCGTGTTTGGTATTTTTCAGGTAATGACAAACGGCCTTTATCATTACCTCGTTCAATTCACTCATTGACAAATATTCGATCTATGTTGGTTGATAGTATGGATTTAGGTGACATCTCTATATTGGGAAGTTTGCAAAGTCTTGAGACTCTTGATTTGGTTGAATGCACAATCAATGAATTGCCAAATGAATTTACAAAATTGGAGAAATTTAAATTGTTGAACTTGGAAAAATGTGAGATTAGAAGGAGTAATCCATTTGAAGTTATTGAAAGATGTTCCTCACTTGAAGAGTTGTATTTCAGAAATAGTTTCAATGGTTTTTGTAGAGAAGTAACCTTACCTAAGTTGCAAAGGTATCATATCCAGAAAGCGTTGGATAAAATGAATGGTTCAATACCAAAATATTTGGTTTTTGATGCTGATGTTGATGATGCGTGTATTTTTTCAAAAGGAGCACTGAAGTATTGTATGCAAACAGCAGAGGTTCTACGGCTGGATGGGATTAAGGGGGAATGGAAAAATCTCATGCCTGAGATGGTTCCTATAGATCTAAGTATGAATAGTCTTGTTGAGCTTAGTTTGAGTTGTATTTCAGAGTTACAGTACCTCATTGATACTATTGGTTCTCAATTACCAAATGTCTTGTCCAAGTTGGTTGTACTAAAATTGGAAAGAATGGACAATTTGGAAGAACTATTCAATGCTAAACCTCAGCAATCTAAAGACCATCACACTGCAGAATTGCCCGGCGTTAGTTTCCCTGTTTCAATTGTTGACTTCTCAAAGCCTGGAGCTACTAGAGACATTGCAAATAGCTAA 2487 0.3679 MVSVLTDLTKQCVEKLINGAITEARHVFCFTCITKEFEEERARLEAERITLGQRAKVAIGRDKDIQANVCLWEEEADKLIQEDTKTKQTCLFGFCPNCIWRYKRGKELANNLEEVKRLFEKGEKLENIELPRRLPDVERYSSQNYISFKSRELKYKELFDALKDDNSYIIGLQGMGGTGKTTMAKEVGKDLKQSKQFDYVIDTTISSTPNITKIQDDIAGPLGLKWEDCNESDRPKRLWSRLTNGDKILLIMDDVWDRDPALDFDAIGIPKQDNHKGCRVLVTSRSKQIFNKMDCDKIIEVDLLSEEDAWIMFKRYANICNSSSKKLISKGRKIVKECKQLPVAIAVIASSLKGQQHREHEWDVTLKSLKKPASMHGIDDDMVGIYKCLKLSYDYMKDEKAKGLFLLCSVFREDQEISIEVLTRLCIGAGVFGEGYGNYDDARNQVIVAKNKLLDSCLLLEVSEERVKMHDFVRDVAQWIANKEIRGVNLSDKNQKSLIEKETNIRYLLCEGKNKDLFSWKFDGSKLETLIVHVDRDEGRRLMEVPNSFLENVMKLRVWYFSGNDKRPLSLPRSIHSLTNIRSMLVDSMDLGDISILGSLQSLETLDLVECTINELPNEFTKLEKFKLLNLEKCEIRRSNPFEVIERCSSLEELYFRNSFNGFCREVTLPKLQRYHIQKALDKMNGSIPKYLVFDADVDDACIFSKGALKYCMQTAEVLRLDGIKGEWKNLMPEMVPIDLSMNSLVELSLSCISELQYLIDTIGSQLPNVLSKLVVLKLERMDNLEELFNAKPQQSKDHHTAELPGVSFPVSIVDFSKPGATRDIANS 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme767g00001 828 PRINTS Disease resistance protein signature 338 352 - -
Trme767g00001 828 PRINTS Disease resistance protein signature 169 184 - -
Trme767g00001 828 PRINTS Disease resistance protein signature 242 256 - -
Trme767g00001 828 PRINTS Disease resistance protein signature 598 614 - -
Trme767g00001 828 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 25 791 - -
Trme767g00001 828 FunFam Probable disease resistance protein At1g61300 131 298 - -
Trme767g00001 828 Gene3D - 392 475 IPR036388 -
Trme767g00001 828 Gene3D - 129 301 IPR027417 -
Trme767g00001 828 Gene3D - 304 391 IPR042197 -
Trme767g00001 828 Pfam NB-ARC domain 159 394 IPR002182 GO:0043531
Trme767g00001 828 SUPERFAMILY L domain-like 468 781 - -
Trme767g00001 828 Gene3D Ribonuclease Inhibitor 476 797 IPR032675 -
Trme767g00001 828 Coils Coil 34 54 - -
Trme767g00001 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 408 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme767g00001 Trme-Chr767 404 2976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme767g00001 170 641 WRKY Transcription Factor Family AT5G45050 25.185 4.56e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme767g00001 - - tpra:123886409 1124.77