Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76617g00001 ATTTTGAGTGTCTCAACATATAGTAACTTGACATTATTACTACTTTGGGTGATTATGATTATTCTGGTTTATTACATAAAGACTAGGAGTACTGAGATCACAGTTTTTGATCCATTTAGTATTCTTGGATTAGAGCCTGGAGCAGCAGAGTCTGAAATAAAGAGAAATTATAGGAGACTTTCTATTCAATACCATCCAGATAAAAATCCAGATCCAGAGGCACACAAGTACTTCGTTGAGCACATTGCTAAGGCTTATCAAGCTCTGACTGATCCAATAGCTCGTGAAAATTACGAAAAGTATGGCCATCCTGATGGTAGACAG 324 0.3673 ILSVSTYSNLTLLLLWVIMIILVYYIKTRSTEITVFDPFSILGLEPGAAESEIKRNYRRLSIQYHPDKNPDPEAHKYFVEHIAKAYQALTDPIARENYEKYGHPDGRQ 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76617g00001 108 PANTHER SEC63 DOMAIN-CONTAINING 3 108 - -
Trme76617g00001 108 Pfam DnaJ domain 37 99 IPR001623 -
Trme76617g00001 108 PRINTS DnaJ domain signature 74 94 IPR001623 -
Trme76617g00001 108 PRINTS DnaJ domain signature 94 108 IPR001623 -
Trme76617g00001 108 PRINTS DnaJ domain signature 57 72 IPR001623 -
Trme76617g00001 108 PRINTS DnaJ domain signature 39 57 IPR001623 -
Trme76617g00001 108 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Trme76617g00001 108 CDD DnaJ 37 91 IPR001623 -
Trme76617g00001 108 SMART dnaj_3 36 94 IPR001623 -
Trme76617g00001 108 FunFam DnaJ protein ERDJ2A 36 108 - -
Trme76617g00001 108 Gene3D DnaJ domain 25 108 IPR036869 -
Trme76617g00001 108 SUPERFAMILY Chaperone J-domain 23 105 IPR036869 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76617g00001 39 101 C2H2 Transcription Factor Family AT1G74250 34.783 4.06e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76617g00001 K09540 - gmx:100776439 188.734