Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76612g00001 GCTCACACAATAGGGCAAGTGAGGTGCTTCTTTTTCAGAGCAAGAATATACAATGAAACAAACATAGACCCTACATTTGCTGCAGAAATGCAAGCAGCTTGTCCTTTTGAAGGGGGTGATAACAATTTATCACCTTTTGATTCCTCCACACCAACTAATTTTGACAATGCATTCTATGACAACTTAGTGAAAAATAAAGGTCTAGTACATTCTGATCAACAACTATTTGGTAATGGATCATCCACAAATGCTCAAGTAAGAACATATAGTAGAAACATGGGACGTTTTAAAAAAGACTTTGCAAATGCAATGTTTAAGATGACATTGCTTACTCCACTTACTGGCACTGATGGTGAGATTAGGCAAAACTGCAGGGTTATCAATGCTCCATCAAACACTACCACCACTGCTTAA 414 0.3768 AHTIGQVRCFFFRARIYNETNIDPTFAAEMQAACPFEGGDNNLSPFDSSTPTNFDNAFYDNLVKNKGLVHSDQQLFGNGSSTNAQVRTYSRNMGRFKKDFANAMFKMTLLTPLTGTDGEIRQNCRVINAPSNTTTTA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76612g00001 137 Gene3D - 108 125 - -
Trme76612g00001 137 SUPERFAMILY Heme-dependent peroxidases 1 128 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme76612g00001 137 Gene3D Peroxidase, domain 2 1 107 - -
Trme76612g00001 137 ProSiteProfiles Plant heme peroxidase family profile. 1 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme76612g00001 137 FunFam Peroxidase 1 107 - -
Trme76612g00001 137 PANTHER PEROXIDASE 72-RELATED 1 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76612g00001 137 PRINTS Plant peroxidase signature 45 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76612g00001 137 PRINTS Plant peroxidase signature 61 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76612g00001 137 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76612g00001 137 Pfam Peroxidase 1 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76612g00001 Trme-Chr76612 348 761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76612g00001 1 128 Peroxidase AT1G14550 51.163 3.42e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76612g00001 K00430 - gmx:100802244 211.846