Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76610g00001 ATGCAAGCAGCTTGTCCTTTTGAAGGGGGTGATAACAATTTATCACCTTTTGATTCCTCCACACCAACTAATTTTGACAATGCATTCTATGACAACTTAGTGAAAAATAAAGGTCTAGTACATTCTGATCAACAACTATTTGGTAATGGATCATCCACAAATGCTCAAGTAAGAACATATAGTAGAAACATGGGACGTTTTAAAAAAGACTTTGCAAATGCAATGTTTAAGATGACATTGCTTACTCCACTTACTGGCACTGATGGTGAGATTAGGCAAAACTGCAGGGTTATCAATGCTCCATCAAACACTACCACCACTGCTTAA 327 0.37 MQAACPFEGGDNNLSPFDSSTPTNFDNAFYDNLVKNKGLVHSDQQLFGNGSSTNAQVRTYSRNMGRFKKDFANAMFKMTLLTPLTGTDGEIRQNCRVINAPSNTTTTA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76610g00001 108 ProSiteProfiles Plant heme peroxidase family profile. 1 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme76610g00001 108 Gene3D Peroxidase, domain 2 2 78 - -
Trme76610g00001 108 Gene3D - 79 99 - -
Trme76610g00001 108 PRINTS Plant peroxidase signature 16 31 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76610g00001 108 PRINTS Plant peroxidase signature 73 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76610g00001 108 PRINTS Plant peroxidase signature 32 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76610g00001 108 Pfam Peroxidase 4 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme76610g00001 108 PANTHER PEROXIDASE 72-RELATED 2 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme76610g00001 108 SUPERFAMILY Heme-dependent peroxidases 2 99 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76610g00001 Trme-Chr76610 29 355 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76610g00001 5 99 Peroxidase AT1G14540 52.632 4.00e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76610g00001 K00430 - gmx:100802244 164.081