Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76543g00001 ATGTTAACAGCAACTGAAGAGGAAGCGGCAGAGGCGTACGACATTGCAGCAATAAAATTCCGAGGTGCAAATGCAGTCACAAACTTTGAGATGAACAGATATGATGTGGATGCCATAATGCAGAGTTCTCTTCCGGTTGGTAGTACAGCGAAGCGCGTGAAGCGATCACTTGGGTCTGAACAGAAAGCTTCTGTAACCAGCAATATTCAGCAGCAGAACAACGCGGAACAGTATGCAGCATGCATGATCAATAGCAACAAAAGCAGCAACATTAATTTCTCAACCATTCCGCATCAGCTGCCAGCTGCACTGAGTACAGTCCCTTATGGAATGGTCCCCTATGATTCGAATCCTTCGGCTTATTATCATCACACCCTCTTCCAACATTTCAATTCTGAATCCAATGATGGCGCTGCAGAATCTGTTGTGAATTCCACCAATGCAACAAATGGTGGACTCAATGCCATGCCACCAACATCAGCAGCNGAGTTCTATTTATGGCCTAATCAGTCTTATTGA 519 0.4489 MLTATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVDAIMQSSLPVGSTAKRVKRSLGSEQKASVTSNIQQQNNAEQYAACMINSNKSSNINFSTIPHQLPAALSTVPYGMVPYDSNPSAYYHHTLFQHFNSESNDGAAESVVNSTNATNGGLNAMPPTSAAEFYLWPNQSY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76543g00001 172 Gene3D AP2/ERF domain 4 32 IPR036955 GO:0003700|GO:0006355
Trme76543g00001 172 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 113 - -
Trme76543g00001 172 ProSiteProfiles AP2/ERF domain profile. 1 30 IPR001471 GO:0003700|GO:0006355
Trme76543g00001 172 SUPERFAMILY DNA-binding domain 5 31 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76543g00001 Trme-Chr76543 174 692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76543g00001 18 172 AP2-EREBP Transcription Factor Family AT5G65510 40.506 1.12e-21 89.0