Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7650g00001 ATGTGCCACAAACATGGGGTGATGCATCGGGATCTCAAACCCGAGAACTTTGTGTTTGCAGACAAAAAGGAAACATCACCTTTAAAAGCTATTGACTTTGGCTTGTCAATTTTCTTTAAACCAGGTGAAAGATTTAATGACATAGTTGGAAGTCCATATTACATGGCCCCTGAAGTATTAAAAAGAAATTATGGCCCTGAAATTGATATCTGGAGTGCTGGAGTCATTCTTTACATCTTACTTTGTGGTGTCCCCCCGTTTTGGGCAGAAACTGAGCAGGGAGTTGCGCAAGCAATTATGCGATCTTTTATTGACTTTAAAAGGGAGCCATGGGCAAAGGTTTCCGATAATGCGAAAGACCTTGTTAAGAAGATGCTTGATCCTGACCCAAATCGTCGGCTTACTGCACAGGAAGTGTTAGGTAATCAGTTCATGTAA 438 0.4132 MCHKHGVMHRDLKPENFVFADKKETSPLKAIDFGLSIFFKPGERFNDIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAETEQGVAQAIMRSFIDFKREPWAKVSDNAKDLVKKMLDPDPNRRLTAQEVLGNQFM 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7650g00001 145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 7 19 IPR008271 GO:0004672|GO:0006468
Trme7650g00001 145 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme7650g00001 145 Pfam Protein kinase domain 2 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme7650g00001 145 FunFam calcium-dependent protein kinase 13 1 145 - -
Trme7650g00001 145 SUPERFAMILY Protein kinase-like (PK-like) 2 144 IPR011009 -
Trme7650g00001 145 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Trme7650g00001 145 SMART serkin_6 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme7650g00001 145 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7650g00001 Trme-Chr7650 293 1755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7650g00001 1 140 EF-hand Containing Proteins AT3G57530 85.714 4.38e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme7650g00001 Pkinase 8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7650g00001 K13412 - qsu:112027620 279.256