Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7643g00001 GTGGATGAATTGGACAAAGCAATTTCTGTAGCATCTAGAGATCCTTCTTGGTATGGCATTGATGAAGTGGAGATTGAAAACCGGAGGAGGTGGACCAGCAATGCTCGCACCCAGGTGCGCACAGTTAAGAAAACAGTGGAAGCTGGTAAGGGATCAAATACAGCAACTCATGCTAGTATAAATGGGATGCATAGGGAATTAATGAGGCTTCCAGATTCTCATCAAAGTACGTCCAAGTCTAACCAATATTCCGCTGGGGATAATGATGATTTCATAGAATCAGAATCAGATAGGCAAATGCTTCTTATAAATTATGGCACACCACCGCCGTGCTGTGCGCAACACTGTTCCTTTACAACACCGTTCCTGCGAGATGTTGTTCCTATGGGTGACATCGTTAATGTGAGCGGCGCCTTTCCTGTTTGA 426 0.4484 VDELDKAISVASRDPSWYGIDEVEIENRRRWTSNARTQVRTVKKTVEAGKGSNTATHASINGMHRELMRLPDSHQSTSKSNQYSAGDNDDFIESESDRQMLLINYGTPPPCCAQHCSFTTPFLRDVVPMGDIVNVSGAFPV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7643g00001 141 MobiDBLite consensus disorder prediction 73 89 - -
Trme7643g00001 141 Pfam Syntaxin 6, N-terminal 1 43 IPR015260 GO:0016020|GO:0048193
Trme7643g00001 141 SUPERFAMILY t-snare proteins 1 46 IPR010989 GO:0016020|GO:0016192
Trme7643g00001 141 Gene3D - 1 49 - -
Trme7643g00001 141 MobiDBLite consensus disorder prediction 44 60 - -
Trme7643g00001 141 MobiDBLite consensus disorder prediction 44 63 - -
Trme7643g00001 141 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7643g00001 Trme-Chr7643 504 1743 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7643g00001 1 104 SNARE and Associated Proteins AT1G28490 64.423 2.87e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7643g00001 K08500 - gmx:100795447 164.081