Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76403g00001 GATGACTCCGCGAGTGTCGCGGTTGGAATGACAATAATGTTGAATCTTTTTATTGCCGGACCTGTATCTGGAGCATCGATGAATCCAGCACGAAGTATTGGTCCGGCAATTGTGATACATATTTATAAAGGGTTATGGATATATATAGTTGGTCCAATTGTTGGAGCCATAGCTGGAGCACTTGCTTATAACTTTCTTAGATCGGTTTACAAGCCACCTACAGAGGTATCAGCTGATAAGTCACCATCAGAATTAACAACAGATAAACAATCTTCAGAGATTACACCAGAACAACCATTGAGGAGCATAGTTGTAGATTGA 321 0.405 DDSASVAVGMTIMLNLFIAGPVSGASMNPARSIGPAIVIHIYKGLWIYIVGPIVGAIAGALAYNFLRSVYKPPTEVSADKSPSELTTDKQSSEITPEQPLRSIVVD 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76403g00001 106 PRINTS Major intrinsic protein family signature 9 31 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme76403g00001 106 PRINTS Major intrinsic protein family signature 46 66 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme76403g00001 106 Gene3D Glycerol uptake facilitator protein. 1 80 IPR023271 -
Trme76403g00001 106 SUPERFAMILY Aquaporin-like 3 73 IPR023271 -
Trme76403g00001 106 MobiDBLite consensus disorder prediction 79 98 - -
Trme76403g00001 106 PANTHER AQUAPORIN NIP2-1 4 80 IPR034294 -
Trme76403g00001 106 MobiDBLite consensus disorder prediction 74 106 - -
Trme76403g00001 106 Pfam Major intrinsic protein 4 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76403g00001 Trme-Chr76403 2 322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76403g00001 2 90 Major Intrinsic Protein MIP AT5G37820 59.551 7.26e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76403g00001 K09874 - gmx:100791338 132.88