Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76396g00001 ATGGGTGAAGAAAAGCAACAAAGTATTCCCGCTTTGCCATGGATGCGAGACCCTGTCGACGTCACTCTCTCTCAACAACTTCCGCTGCATTCTGTTCCTTCTCTCCACCCCAAGTTGAAGTCGGCGCTGGAGGACATGGGAATCTCAAACCTATTCCCAGTGCAAGTCGCAGTTTGGCATGAAACGGTTGGCCCTGGCAATTTTGAGCGAGACATTTGTGTTAACTCACCCACTGGAAGCGGCAAAACCCTCGCCTACGCTCTCCCCTTAGTGCAGATGCTATCAGACCGCATCACTAGATGCCTCCGCGCCTTGGTTGTGGTCCCCACTCGCGACCTTGCTTTGCAGGTCAAACAAGTCTTTGACGCCGTTGCGTCTCCATTAGGCCTGCGCGTTGGCTTGGCCGTCGGTCAATCATC 419 0.5394 MGEEKQQSIPALPWMRDPVDVTLSQQLPLHSVPSLHPKLKSALEDMGISNLFPVQVAVWHETVGPGNFERDICVNSPTGSGKTLAYALPLVQMLSDRITRCLRALVVVPTRDLALQVKQVFDAVASPLGLRVGLAVGQSS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76396g00001 140 Gene3D - 17 140 IPR027417 -
Trme76396g00001 140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 139 IPR027417 -
Trme76396g00001 140 PANTHER RNA HELICASE 34 138 - -
Trme76396g00001 140 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 63 140 IPR014001 -
Trme76396g00001 140 Pfam DEAD/DEAH box helicase 53 139 IPR011545 GO:0003676|GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76396g00001 71 140 Eukaryotic Initiation Factors Gene Family AT3G13920 35.714 9.66e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76396g00001 K14807 - qsa:O6P43_013012 216.083