Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme763416g00001 AGTGTTAGCTCAAACTTGATTATTGATTCAGACCCTTTGAACTGGGATTCAGCTGCTAATTTACTCAAGGGTAGCCACTTTGATGAAGTTAAACGGATGGTAGAAGAGTACAAGAAGCCAGTGATATGTCTTGGTGGGGTAGAGACACTAACTATATCTCAGGTTGCTGCTGTTGCTAACAGTAGCTCACATGTTAAGGTTGAACTCTCAGAGTCTTCAAGGGCTGGTGTTGAAGCCAGCTG 242 0.4339 SVSSNLIIDSDPLNWDSAANLLKGSHFDEVKRMVEEYKKPVICLGGVETLTISQVAAVANSSSHVKVELSESSRAGVEAS 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme763416g00001 80 Gene3D - 2 80 IPR024083 -
Trme763416g00001 80 SUPERFAMILY L-aspartase-like 11 80 IPR008948 GO:0003824
Trme763416g00001 80 PANTHER HISTIDINE AMMONIA-LYASE 11 80 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme763416g00001 Trme-Chr763416 3 244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme763416g00001 3 80 Monolignol Biosynthesis Gene Families AT2G37040 62.025 9.06e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme763416g00001 K10775 - ccaj:109814379 110.538