Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme763249g00001 TACTTGGCGCCTGAAATTATTAAAGGTGAAGGACATGGCAGTGCTGTGGATTGGCGGACGTTCAGGATATTCTTATACGAACTCTTGTTTGGTCGAACACCATTCAATGGTTCAGCAAACCGAGCATCCCTGTTTAATGTTGTTGGACAGCCTTTAAGATTTCAACTTCAAGAATCTCCTACTGTCAGCTCTGCTGCGAGGGATTTGATCAGAGGTTTACTTGTAAAAGAGCCTCAACACTGA 243 0.4362 YLAPEIIKGEGHGSAVDWRTFRIFLYELLFGRTPFNGSANRASLFNVVGQPLRFQLQESPTVSSAARDLIRGLLVKEPQH 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme763249g00001 80 ProSiteProfiles Protein kinase domain profile. 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme763249g00001 80 Gene3D Transferase(Phosphotransferase) domain 1 1 80 - -
Trme763249g00001 80 Pfam Protein kinase domain 1 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme763249g00001 80 PANTHER FLIPPASE KINASE 1-RELATED 1 80 - -
Trme763249g00001 80 SUPERFAMILY Protein kinase-like (PK-like) 1 79 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme763249g00001 Trme-Chr763249 1 243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme763249g00001 1 80 AGC Kinase Gene Family AT5G55910 85.000 8.97e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trme763249g00001 Pkinase 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme763249g00001 K08286 - oeu:111392218 140.198