Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76253g00001 ATGAGTTCCGGCGAATTGGGCTGCATCTACGCCACTTTGATTCTTCACGATGATGGAATCCCAATCACCGCGGAGAAGATCAGCACTTTGTTGAAGGCTGCTAATGTTACCGTTGAATCCTACTGGCCAAGCTTATTCGCTAAGCTTGCTCAGAGCAGGAACGTTGATGATCTTGTTTTGAACTCTGGCGCTGCCGGTGGTGCCGCTGTCGTCGCAGCAGCACCTGCTGCTGGTGGTGGTGCCGCAGCAGCAGCCGCACCTGCTGTTGAGGAGAAGAAG 279 0.5412 MSSGELGCIYATLILHDDGIPITAEKISTLLKAANVTVESYWPSLFAKLAQSRNVDDLVLNSGAAGGAAVVAAAPAAGGGAAAAAAPAVEEKK 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76253g00001 93 Gene3D - 1 63 IPR038716 -
Trme76253g00001 93 CDD Ribosomal_P1 5 61 - -
Trme76253g00001 93 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 93 - -
Trme76253g00001 93 FunFam 60S acidic ribosomal protein P1 1 63 - -
Trme76253g00001 93 Pfam 60s Acidic ribosomal protein 22 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76253g00001 1 93 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 56.989 6.34e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76253g00001 K02942 - sspl:121749073 108.997