Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76216g00001 GATAAAAGTGATGTATATGCTTTTGGAGTTGTGCTTCTTGAGCTTCTATTAGGAAGGAAGCCTGTGGAAAAACTGAACCCATCTCAATGCCAATCTATTGTCACATGGGCCATGCCGCAGCTCACAGATAGATCAAAGCTTCCAAATATTGTGGATAATGTGATTAAGAATACAATGGATCCTAAGCACTTATTCCAGGTTGCTGCTGTGGCAGTGTTATGTGTGCAACCAGAGCCATGTTACCGCCCCCTGATTGCAGATGTTCTACACTCCCTCATCCCTCTTGTACCTGTTGAGCTAGGAGGAACTCTC 312 0.4455 DKSDVYAFGVVLLELLLGRKPVEKLNPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLFQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76216g00001 104 Pfam Protein tyrosine and serine/threonine kinase 2 61 IPR001245 GO:0004672|GO:0006468
Trme76216g00001 104 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 96 - -
Trme76216g00001 104 SUPERFAMILY Protein kinase-like (PK-like) 2 90 IPR011009 -
Trme76216g00001 104 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
Trme76216g00001 104 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76216g00001 Trme-Chr76216 2 791 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76216g00001 2 96 Receptor kinase-like Gene Family AT3G58690 52.632 2.18e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Trme76216g00001 PK_Tyr_Ser-Thr 1.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76216g00001 - - gmx:100784795 197.593