Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76198g00001 ATGAATATCCGTGAAGCATTAATGAGGGCTGAAAAAGCTTTAAAGATTAGCAAACGCAAGGATTACTACAAGATTTTGGAAATTTCAAAACATGCTTCCGCTGCTGAGATAAAACGTGCATACAAGAAACTTGCCTTACAATGGCACCCGGATAAGAATGTTGACAATAGAGAAGCAGCAGAGGCAAAATTCCGAGAAATCGCTGCCGCATACGAGAGTTCTGATGAGAGATCTGGTGTAGTGCTAGCAATGACCAG 257 0.4163 MNIREALMRAEKALKISKRKDYYKILEISKHASAAEIKRAYKKLALQWHPDKNVDNREAAEAKFREIAAAYESSDERSGVVLAMT 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76198g00001 85 CDD DnaJ 21 72 IPR001623 -
Trme76198g00001 85 ProSiteProfiles dnaJ domain profile. 21 79 IPR001623 -
Trme76198g00001 85 Pfam DnaJ domain 21 72 IPR001623 -
Trme76198g00001 85 Gene3D DnaJ domain 3 79 IPR036869 -
Trme76198g00001 85 SMART dnaj_3 20 78 IPR001623 -
Trme76198g00001 85 PRINTS DnaJ domain signature 23 41 IPR001623 -
Trme76198g00001 85 PRINTS DnaJ domain signature 41 56 IPR001623 -
Trme76198g00001 85 PRINTS DnaJ domain signature 59 79 IPR001623 -
Trme76198g00001 85 SUPERFAMILY Chaperone J-domain 15 72 IPR036869 -
Trme76198g00001 85 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 1 72 IPR044620 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76198g00001 Trme-Chr76198 86 443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76198g00001 17 72 C2H2 Transcription Factor Family AT1G74250 42.623 3.73e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76198g00001 K09523 - gmx:100804685 129.028