Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76121g00001 ATGAGATCGAGATCTCAAAGGGCAGTTGCGGTTGAGAAAGAAGAGAAAGTGGCTGTTGGTGACGGTTTAAGACAGAGTTGTTGGGCTAACATGCCACAAGAACTTCTTCGTGAGGTTCTTGTCAGAATTGAAGCATCCGAGGACACGTGGCCACCTAGGAAAAACGTTGTTGCATGTGCTGGAGTGTGTCGGAACTGGAGAGTCATCACCAAAGAAATCGTTAAAAAACCTGAAATTTCTGCTAAGATTACTTT 254 0.4449 MRSRSQRAVAVEKEEKVAVGDGLRQSCWANMPQELLREVLVRIEASEDTWPPRKNVVACAGVCRNWRVITKEIVKKPEISAKIT 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76121g00001 84 SUPERFAMILY F-box domain 22 71 IPR036047 GO:0005515
Trme76121g00001 84 PANTHER TUBBY-RELATED 15 84 - -
Trme76121g00001 84 Pfam F-box domain 28 77 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme76121g00001 Trme-Chr76121 1 254 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76121g00001 2 84 TUB Transcription Factor Family AT2G47900 67.470 3.32e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76121g00001 K19600 - gmx:100778346 130.568