Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme760949g00001 ATGGGAGTAAATTCACCAGTCTACACAAGAACACCAACTATGTTCCTTGATTTCACCATGTTGCCAGGAACTCAGCTGCATCAAAATATTCAAGAATCATGGAATTCATTTGCATACATAATGGAAGGTGAAGGTGTTTTTGGTTCACCAAATTCATCACCAATTATGGCTCACCATGTCATTGTTTTCACTCAAG 196 0.3827 MGVNSPVYTRTPTMFLDFTMLPGTQLHQNIQESWNSFAYIMEGEGVFGSPNSSPIMAHHVIVFTQ 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme760949g00001 65 PANTHER PIRIN-RELATED 1 65 IPR012093 -
Trme760949g00001 65 CDD cupin_pirin_C 12 65 - -
Trme760949g00001 65 Gene3D Jelly Rolls 1 65 IPR014710 -
Trme760949g00001 65 SUPERFAMILY RmlC-like cupins 2 53 IPR011051 -
Trme760949g00001 65 Pfam Pirin C-terminal cupin domain 15 64 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme760949g00001 Trme-Chr760949 28 223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme760949g00001 1 63 Calmodulin-binding Proteins AT3G59220 73.438 1.72e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme760949g00001 K06911 - jre:108986319 107.842