Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme76092g00001 ATGAGTTGCATTGATCTTTGGCTTTCCAGCCACAGTACCTGCCCTCTTTGTCGTTTGTCGCTACTATCTACTGCTAAATCTTCAACAGAAACATCCAATATGCAGGCCACAGGCAATGAAGAAATGGAGATGCAACAAAGCAATGAAGAAACACTAGCAATGGAATTCTCTGACTCAAGATCTACTAGTAGGCATCAAGAAACCACTGTCATTCAAAATGTCTCCGGAGAAGTTGCGATCAGCGCTCACCACATCAATGTTGAGGGGGAAAATGCGCGAAACAACCAATAG 291 0.4364 MSCIDLWLSSHSTCPLCRLSLLSTAKSSTETSNMQATGNEEMEMQQSNEETLAMEFSDSRSTSRHQETTVIQNVSGEVAISAHHINVEGENARNNQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme76092g00001 96 PANTHER OS11G0150450 PROTEIN 1 70 - -
Trme76092g00001 96 SUPERFAMILY RING/U-box 2 23 - -
Trme76092g00001 96 MobiDBLite consensus disorder prediction 27 68 - -
Trme76092g00001 96 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 70 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme76092g00001 1 22 C3H Transcription Factor Family AT4G10150 81.818 8.88e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme76092g00001 K19039 - gmx:100794211 114.39