Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75937g00001 ATGCCTCCAGAGTACGCTGGCCGTGGACATTTCTCTATGAAATCGGATGTCTTTAGTTATGGTGTGATAGTACTCGAGATAGTGTCCGGGAAGAAAAACACAAAATTTTCCGATCCAGAATATTACCACAATCTTCTTGGATATGCGTGGAGATTATGGTCAGAAGAAAGGGCATTGGAACTATTGGATGAAAGTTTAGGGCAACAATGTACACCTTCTGAAGTCATTCGATGCGTACAAGTGGGGTTATTATGCGTTCAACAAAGACCGGAAGATAGGCCAGACATTTCATCTGTGGTTCTAATGCTGAATGGTGAGAAATTATTGCCAAAGCCAAATGTTCCTGGCTTTTACATTGAAAACAATGTAAAACCTGAATTAGATTCTTCGTCTACGAATCATAATCTATTTTCGACAAATGAATTATCCATCACAGAGTTAGTTGCAAGATAG 453 0.3929 MPPEYAGRGHFSMKSDVFSYGVIVLEIVSGKKNTKFSDPEYYHNLLGYAWRLWSEERALELLDESLGQQCTPSEVIRCVQVGLLCVQQRPEDRPDISSVVLMLNGEKLLPKPNVPGFYIENNVKPELDSSSTNHNLFSTNELSITELVAR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75937g00001 150 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 147 - -
Trme75937g00001 150 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme75937g00001 150 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Trme75937g00001 150 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Trme75937g00001 150 SUPERFAMILY Protein kinase-like (PK-like) 1 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75937g00001 Trme-Chr75937 43 698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75937g00001 1 150 Receptor kinase-like Gene Family AT4G23140 49.677 5.14e-44 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme75937g00001 PK_Tyr_Ser-Thr 1.4e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75937g00001 - - tpra:123905706 295.049