Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75812g00001 ATGTCAACTGGGGGGATGGGGAACAACCTCTTAGGATCATATATCCATCACAAAGAAATCAAGGCTGCGATGGGCATCAAAATCACTGCCCAGGGTCTTGAACATGCTATTGCTGGCGCAAGTTTATATGTGGTGAAGCCTGATGATGATTTGGAATATATTAAAAAGGCGGCCTTGGAAGACGTGGAGTCAGTCTTGAGCAGGATTGACAGGAGCGGTGAGGGCGTTTGTGTCCAGGCATCTACCCTTGGNNNNNNNNTNNNNNNNNNNGAGTTTTTGAAAACTCCAGAAGTGAACATTCCTGTTAGTGCTATAAACATAGGCCCTGTACATAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATTCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGAACTTGCAGATGAATTGG 448 0.4286 MSTGGMGNNLLGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGXXXXXXEFLKTPEVNIPVSAINIGPVHKKDVMKASVMLEKKREYSTILAFDVKVTPEARELADEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75812g00001 149 Gene3D - 74 149 IPR036925 -
Trme75812g00001 149 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 17 148 IPR015760 -
Trme75812g00001 149 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 51 148 IPR036925 -
Trme75812g00001 149 Gene3D Translation factors 8 70 - -
Trme75812g00001 149 Pfam Translation-initiation factor 2 56 148 IPR023115 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75812g00001 Trme-Chr75812 81 739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75812g00001 12 149 Eukaryotic Initiation Factors Gene Family AT1G76810 75.362 4.83e-65 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75812g00001 K03243 - gmx:100814875 229.565