Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75786g00001 ATGTTGTCCTTGAGTTATCCTAATGAACTGAAAAACTTCATTCAAAAGGCTGAAAACAATATAGATATTGAATCATTGCTGAGGGAACATAAAAAAATTGGAATATGGGGTTCGGGAGGAATGGGAAAGACAACTATAGCAAAATATTTATTTGCCTGTCACTTTGCCCAATATGACAGTGTGTGCTTATTGGAAAATATAAGAGAAGATACAGAAAAGAATGGAGTAACACACGTACGTGATAAGCTTTTGCGTGAGTTATTAAGGAGACCGGTTACTGCATCTGAAATTGTTGGACTTTACATGTCCATCAAGAGGAGCTTGATTGGTAAAAAGATTTTAGTAGTTCTTGATGATGTGGATAATATGCAACAACTAGATGATCTGTGTAGCTACCTTGATGAGCTTGGACCAGACAGTAAACTCATTATCACAACAAGGAATAGCCGTATTCTTGGCGGAAGAGTTGATAAGATATGTATGGTCAAAGAATGGAATTTTGAAGAATCTCTGAAGCTTTTTAGCTTAGGAGCCTTCAAACAAGAGCATCCTAAAGAAGGGTACGAGCGTCTCTCCAAAAGGGCAGTTGAATATGCAGGAGGCATTCCATTAGCCTTAAAAGTGTTGGGTTCTCATTTGTATTCTATAAAATTTAATTCCTGGGAATCTGAATTGAAACATCTTGAGAAAAACGTGGAATCCTTGAGCGAAGTTGATAA 719 0.37 MLSLSYPNELKNFIQKAENNIDIESLLREHKKIGIWGSGGMGKTTIAKYLFACHFAQYDSVCLLENIREDTEKNGVTHVRDKLLRELLRRPVTASEIVGLYMSIKRSLIGKKILVVLDDVDNMQQLDDLCSYLDELGPDSKLIITTRNSRILGGRVDKICMVKEWNFEESLKLFSLGAFKQEHPKEGYERLSKRAVEYAGGIPLALKVLGSHLYSIKFNSWESELKHLEKNVESLSEVD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75786g00001 239 Gene3D - 1 158 IPR027417 -
Trme75786g00001 239 Pfam NB-ARC domain 32 231 IPR002182 GO:0043531
Trme75786g00001 239 PRINTS Disease resistance protein signature 199 213 - -
Trme75786g00001 239 PRINTS Disease resistance protein signature 32 47 - -
Trme75786g00001 239 PRINTS Disease resistance protein signature 107 121 - -
Trme75786g00001 239 Coils Coil 218 238 - -
Trme75786g00001 239 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 230 IPR044974 GO:0006952
Trme75786g00001 239 Gene3D - 166 239 IPR042197 -
Trme75786g00001 239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 232 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75786g00001 Trme-Chr75786 1 719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75786g00001 23 211 WRKY Transcription Factor Family AT4G12020 35.079 2.88e-24 99.4