Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75626g00001 ATGGTAGATCCAAAGAAAGGAGCACTTTCTGGGCTTGGCCCACTTTTGATTGGGTTTGTGGTAGGGGCTAATATCATGGCTGGTGGGGCTTTCTCAGCTGCTTCAACGAACCCAGCAAGATCATTTGGGCCTGCTTTGGTTAGTGGAAATTGGACTAACCATTGGGTTTATTGGGTTGGGCCTCTTATTGGTAGTGGGCTTGCTGGTTTCATTTATGAGAATTTCTTCATTAATAGAGATCATGTTCCTCTGGTTGTAGATGAAGAAAGCTACTGA 276 0.4457 MVDPKKGALSGLGPLLIGFVVGANIMAGGAFSAASTNPARSFGPALVSGNWTNHWVYWVGPLIGSGLAGFIYENFFINRDHVPLVVDEESY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75626g00001 91 PRINTS Major intrinsic protein family signature 18 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme75626g00001 91 PRINTS Major intrinsic protein family signature 55 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme75626g00001 91 Pfam Major intrinsic protein 3 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme75626g00001 91 SUPERFAMILY Aquaporin-like 2 84 IPR023271 -
Trme75626g00001 91 Gene3D Glycerol uptake facilitator protein. 1 88 IPR023271 -
Trme75626g00001 91 PANTHER AQUAPORIN-8 2 80 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75626g00001 Trme-Chr75626 455 730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75626g00001 1 89 Major Intrinsic Protein MIP AT2G25810 79.775 1.26e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75626g00001 K09873 - gmx:100793258 165.236