Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme756069g00001 ATGGCGCCGGAATTTCAATTAACTGGCGTTGCGACGCAGAAGACGGACGTGTACGCTTTTGGCGTGGTGGTTTTGGAGCTTCTGAGCGGGTTAGAAGCGGTGAGATTTGAATTGGAGGGGAATGATGGCGGGTATAGGAGGGTGAGTGTGGTGGATACGGCGAGGGAAGCGTTGAAGGAGCACGGTGGCGTGAGAAAGTGGGTTGATCGGAG 212 0.5519 MAPEFQLTGVATQKTDVYAFGVVVLELLSGLEAVRFELEGNDGGYRRVSVVDTAREALKEHGGVRKWVDR 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme756069g00001 70 PANTHER OS09G0572100 PROTEIN 1 70 - -
Trme756069g00001 70 SUPERFAMILY Protein kinase-like (PK-like) 1 33 IPR011009 -
Trme756069g00001 70 Gene3D Transferase(Phosphotransferase) domain 1 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme756069g00001 Trme-Chr756069 11 222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme756069g00001 1 47 Receptor kinase-like Gene Family AT1G51940 52.083 2.66e-09 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme756069g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme756069g00001 - - mtr:11414164 122.479