Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7559g00001 ATGACAGAAGCATGCTCTTCACTGACATTCTTGACACTGTATGATCCGACGCAAAAAACCACAAGCCGTCCTTTTCAAACAAATAGTGAGGTAGAATCCAAATATCTCATTGACCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAACTGAAGATATGCACAGATTCCTCTGGCGACAATGGGAGAATTTTAACTAGAGGACCACATTTAATGCTCAGATATTGGGATCAAACTATCGAAAACTCGTCAAGTCAGAGGAATGAAGTATGGCTTGACACTGGTGACATTGGATCAATGGACTGTCATGGTAATTTGTGGCTCCTTGGACGTACAAATGGTCGCATCAAGAGTGGTGGAGAGAATATTTACCCTGAAGAGGTTGAGGCAATTCTACTAGAACATCCAGGGATTGCAAGTATTGTGATTGTGGGAATCCCAGATGCGCGTTTCACAGAGACGGTAGCAGCATGTATTCAACCACGAGAAAATTGGCAATGGTTTAAGATACCAAAGATATTTATTGAATGGAGGAAGCCTTTTCCAGTCACTACCACTGGAAAAATAAGAAGAGATCAAGTCAGAAAGGAGCTTATGTCTGAGCTACAAATTTTGCATAGTAATCTTTGA 639 0.4178 MTEACSSLTFLTLYDPTQKTTSRPFQTNSEVESKYLIDQPQGVCVGKAAPHVELKICTDSSGDNGRILTRGPHLMLRYWDQTIENSSSQRNEVWLDTGDIGSMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIASIVIVGIPDARFTETVAACIQPRENWQWFKIPKIFIEWRKPFPVTTTGKIRRDQVRKELMSELQILHSNL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7559g00001 212 Pfam AMP-binding enzyme C-terminal domain 130 167 IPR025110 -
Trme7559g00001 212 PANTHER ACYL-COA SYNTHETASE 1 203 - -
Trme7559g00001 212 Gene3D - 1 120 IPR042099 -
Trme7559g00001 212 SUPERFAMILY Acetyl-CoA synthetase-like 1 203 - -
Trme7559g00001 212 CDD AFD_class_I 1 193 - -
Trme7559g00001 212 Pfam AMP-binding enzyme 2 121 IPR000873 -
Trme7559g00001 212 Gene3D - 121 205 IPR045851 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7559g00001 46 205 Monolignol Biosynthesis Gene Families AT4G05160 26.667 2.21e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7559g00001 K14760 - gmx:100787691 317.775