Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme755252g00001 ATGATTTCAAAAGGCTCGATAGTTTGCGTGAACATTTGGGCCATGGGAAGGGACCCAAAGGTCTGGAAAAACCCTTTGGAGTTTAGGCCTGAAAGGTTTATGGAATTTGGCATAGAGAGTGATATAGATATCAAAGGACATCACTTTGAATTGTTGCCATTTGGTTCGGGAAGGAGAGGTTGTCCAGGGATGCCTTTGGCCATGCGCCAATTGCCCAC 218 0.4587 MISKGSIVCVNIWAMGRDPKVWKNPLEFRPERFMEFGIESDIDIKGHHFELLPFGSGRRGCPGMPLAMRQLPT 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme755252g00001 73 SUPERFAMILY Cytochrome P450 2 71 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme755252g00001 73 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 72 - -
Trme755252g00001 73 Gene3D Cytochrome P450 1 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme755252g00001 73 Pfam Cytochrome P450 2 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme755252g00001 73 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 54 63 IPR017972 GO:0005506|GO:0016705
Trme755252g00001 73 PRINTS E-class P450 group I signature 11 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme755252g00001 73 PRINTS E-class P450 group I signature 51 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme755252g00001 73 PRINTS E-class P450 group I signature 61 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme755252g00001 Trme-Chr755252 1 218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme755252g00001 2 68 Monolignol Biosynthesis Gene Families AT2G40890 64.179 8.98e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme755252g00001 - K23179 gmx:100783503 134.806