Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7550g00002 ATGGTTGCACTTGCAGAACAGGAAGAAATAGCGAAAGGCAAGCTCTTGGGAGAGCCTCTAACATGGGAAGACCTTTCAAAGATGAAGTACACTTGGAGAGTAGCAAATGAAACTCTTAGAAGGTTTCCTCCCATCTTTGGTGGCTTCAGAAAAGCAGCAACAGATATTGAATATGACGGATACGTTATACCTAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACACACATGGACAACAACATTTTCCCTGAACCGTCAAAATTTGATCCGAGTAGATTTGAAAACCAAGCATCTACACCACCTTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGATATGAGTTTGCTAGGGTTGAAATTCTTGTGGCAATTCATTACCTTGTGACCAAGTTCAGTTGGAAGCTACTTTCGGACAATTCTTTCAGCAGGGATCCAATGCCAACACCAACTCAAGGCCTACTGATTGAACTTTCCCCACGGAAACAACTATCTTAG 510 0.4255 MVALAEQEEIAKGKLLGEPLTWEDLSKMKYTWRVANETLRRFPPIFGGFRKAATDIEYDGYVIPKGWQIFWVTSMTHMDNNIFPEPSKFDPSRFENQASTPPYCFVPFGGGARICPGYEFARVEILVAIHYLVTKFSWKLLSDNSFSRDPMPTPTQGLLIELSPRKQLS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7550g00002 169 FunFam Os07g0491800 protein 4 165 - -
Trme7550g00002 169 SUPERFAMILY Cytochrome P450 5 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 Pfam Cytochrome P450 17 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 Gene3D Cytochrome P450 3 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 PRINTS B-class P450 signature 33 44 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 PRINTS B-class P450 signature 78 93 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 PRINTS B-class P450 signature 106 115 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 PRINTS B-class P450 signature 50 77 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 PRINTS B-class P450 signature 115 126 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7550g00002 169 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 108 117 IPR017972 GO:0005506|GO:0016705
Trme7550g00002 169 PANTHER CYTOCHROME P450 26 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7550g00002 Trme-Chr7550 1183 1772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7550g00002 6 145 Cytochrome P450 AT5G45340 48.936 3.98e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7550g00002 - - vvo:131633618 321.627