Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75457g00001 AAAGCTGCAAATATATTACTTGATGATTATTGTGAAGCAGTAGTTGGAGATTTTGGTTTGGCAAAGCTTTTAGACCACAAAGATTCACATGTAACAACTGCAGTTAGGGGCACAGTAGGACATATAGCACCTGAGTATCTTTCCACAGGACAATCTTCTGAAAAGACTGATGTTTTTGGATTTGGCATTTTGCTTCTTGAGTTGATTACAGGTTTGAGGGCTCTAGAATTTGGCAAGGCAGCTAACCAAAAAGGAGCCATGCTTGATTGGGTAAGTTTGTTTTCATTCGAGGTTTAA 297 0.3872 KAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVSLFSFEV 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75457g00001 98 SUPERFAMILY Protein kinase-like (PK-like) 1 76 IPR011009 -
Trme75457g00001 98 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Trme75457g00001 98 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 79 - -
Trme75457g00001 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme75457g00001 98 Pfam Protein kinase domain 1 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75457g00001 Trme-Chr75457 1 297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75457g00001 1 91 Receptor kinase-like Gene Family AT5G16000 94.505 7.79e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Trme75457g00001 Pkinase 2.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75457g00001 - - cpap:110813076 182.57