Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75291g00001 CAGCGTTCAGTTACTAACGACGCTCCTTGGATATTAACTGTTGGTGCCACCACCATTGACCGTGGCCTTCAATCCAACATTGTCTTGGGTAATAAGAAAGTTGTCAAGGGTGAAGCTATAAATTTCTCTCCTCTTTCAAAATCTGCTGATTATCCATTGATAACCGGAGAGTCTGCAAAAGCAACTACCGCTGACTTAGCAGACGCAAGACAGTGTCATTTAGATGCATTAGATAAGAAAAAAGTCAATGGAAGCATTGTCATTTGCGATGGCACAAATGATGTTGATTATTCAACCACGGACAAAATTGGTGTTGTACAAGATTTGGGTGGATTAGGTCTTGTTCATATTACTAACAACGAAGGAGCAGTGGCAGATAATTATGGAGATTTCCCAGCAACAATTGTTAGACCAAAAGATGATGCCACAATCCTCCAATATGTCAATTCAACAAGGTAA 459 0.4009 QRSVTNDAPWILTVGATTIDRGLQSNIVLGNKKVVKGEAINFSPLSKSADYPLITGESAKATTADLADARQCHLDALDKKKVNGSIVICDGTNDVDYSTTDKIGVVQDLGGLGLVHITNNEGAVADNYGDFPATIVRPKDDATILQYVNSTR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75291g00001 152 CDD PA_subtilisin_like 26 152 - -
Trme75291g00001 152 Gene3D - 20 152 - -
Trme75291g00001 152 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 150 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75291g00001 Trme-Chr75291 1 641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75291g00001 3 152 Subtilisin-like Serine Gene Family AT1G20160 47.333 5.76e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75291g00001 K25898 - gmx:100820194 199.134