Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75276g00001 ATGGGTAAAGAAAAGGTTCACATTAATATTGTTGTCATTGGCCATGTTGACTCTGGGAAGTCAACTACCACCGGTCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTSATTGAGAGGTTTGAGAAAGAAGCTGCYGAGATGAACAAGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAACGTGAAAGAGGTATCACCATTGACATTGCTCTGTGGAAGTTTGAGACCACTAAGTACTACTGCACTGTCATTGATGCCCCCGGACACAGAGATTTCATTAAGAACATGATT 309 0.4304 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMI 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75276g00001 103 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Trme75276g00001 103 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Trme75276g00001 103 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Trme75276g00001 103 FunFam Elongation factor 1-alpha 1 103 - -
Trme75276g00001 103 PANTHER TRANSLATION FACTOR 4 103 - -
Trme75276g00001 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 103 IPR027417 -
Trme75276g00001 103 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Trme75276g00001 103 Gene3D - 1 103 IPR027417 -
Trme75276g00001 103 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 103 IPR000795 GO:0003924|GO:0005525
Trme75276g00001 103 Pfam Elongation factor Tu GTP binding domain 6 103 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75276g00001 Trme-Chr75276 1 309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme75276g00001 1 103 Eukaryotic Initiation Factors Gene Family AT1G07930 99.029 1.28e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75276g00001 K03231 - pda:103708765 213.001