Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme75195g00001 ATGAGTGATTTTGGAGTATGTGATTCCGGCATTGCTAGATTGTTTCTGACAGGACCATCTATACTTGGTTCAACTGATTTGATTCATACTTTGGAGGAAGTTAAAGGTTTAGGGTTTGATCCTTCAACTTCCCCTTTTGTGGTAGCTTTGGTTGCAAAGAAAGGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGATGCCTTTAAGAAGTGGGGTTGGTCTGATGAAGATGTTCTTAAAGCATTTAGAAAGAAGCCTCAATGTATGTTTGGATCCATTGATAAGATTAATTTAGTGATGAGCTTTTGGGTCAATCAATTGGGTTGGGATGCTATGGCCATTGCCAAAACACCGCATATTTTGTCATTAAGTTTAGAAAAAAAGATCATTCCGAGAGCCGCAGTTGTGCAATATCTTCTTAGTAAAG 427 0.377 MSDFGVCDSGIARLFLTGPSILGSTDLIHTLEEVKGLGFDPSTSPFVVALVAKKGMSKKLWDEKVDAFKKWGWSDEDVLKAFRKKPQCMFGSIDKINLVMSFWVNQLGWDAMAIAKTPHILSLSLEKKIIPRAAVVQYLLSK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme75195g00001 142 Gene3D Transcription termination factor 3, mitochondrial 1 142 IPR038538 -
Trme75195g00001 142 PANTHER CGI-12 PROTEIN-RELATED 3 140 IPR003690 GO:0003690|GO:0006355
Trme75195g00001 142 SMART mt_12 111 142 IPR003690 GO:0003690|GO:0006355
Trme75195g00001 142 SMART mt_12 12 40 IPR003690 GO:0003690|GO:0006355
Trme75195g00001 142 SMART mt_12 79 110 IPR003690 GO:0003690|GO:0006355
Trme75195g00001 142 Pfam mTERF 2 136 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme75195g00001 Trme-Chr75195 250 676 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme75195g00001 mTERF 5.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme75195g00001 K15031 - aprc:113852255 168.318