Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74764g00001 ATGTTTATGGTTGGACTAGAGAAGATGGGAAAAGGAGATTGGAGAGGTATCTCTAAAAACTTCGTTCCCACAAGAACCCCTACACAAGTCGCGAGTCATGCTCAAAAATACTTTCTCCGATTGTCAACTATCAATAACAAAAAGCGACGTTCAAGTCTCTTTGACCTGGTTGGGAGCAAGAACACCAACACAAAAGGCCAAGACAACGCTAATTCAATTGTTTTGAGTCATAAATTAGAGGATAAGTGTAAATGTGAAGTTGAGATTAATGATGGCACCACTTTCTTTAAACAAGAAGTAGTCAAATCAGATAAGCAAGAAACTAATTACTCTCAAGTTAATTGGCTACATAATCACTCTTCAAATTATGCAACTGTGCCTAATTTGGACCTCACACTTGCAGTTTCATCCCCTAAGAAGACTAATAAGTCCACCCCAGCTGGCCCATTGCTTTTTGGCCCAATTAGTGTCACTTAA 477 0.3899 MFMVGLEKMGKGDWRGISKNFVPTRTPTQVASHAQKYFLRLSTINNKKRRSSLFDLVGSKNTNTKGQDNANSIVLSHKLEDKCKCEVEINDGTTFFKQEVVKSDKQETNYSQVNWLHNHSSNYATVPNLDLTLAVSSPKKTNKSTPAGPLLFGPISVT 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74764g00001 158 Gene3D - 1 45 - -
Trme74764g00001 158 PANTHER TRANSCRIPTION FACTOR KUA1 1 119 - -
Trme74764g00001 158 MobiDBLite consensus disorder prediction 138 158 - -
Trme74764g00001 158 SUPERFAMILY Homeodomain-like 1 42 IPR009057 -
Trme74764g00001 158 CDD SANT 5 38 IPR001005 -
Trme74764g00001 158 NCBIfam myb-like DNA-binding domain, SHAQKYF class 1 40 IPR006447 GO:0003677
Trme74764g00001 158 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 42 IPR017930 -
Trme74764g00001 158 Pfam Myb-like DNA-binding domain 4 38 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme74764g00001 Trme-Chr74764 98 679 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme74764g00001 Myb_DNA-binding 6.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74764g00001 - - cam:101500241 180.644