Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74736g00001 ATGGCTGCAGCTGCTTATGATGTTGCTGCTCTTGCTTTAAAAGGACCTGAAACAACTCTTAACTTTCCCGATTCAATTCCTTCTTACCCTATTCCTGCTTCATTATCTTCAACTGATATTCGTGCTGCTGCTGAAGCTGCTGCACAGACCAGAATCATGAAAGTGATCACTCCTAAACAAGAAGAAGGACAACAAGAACAACAAAAACCTTCATCTTCTGGTTTTGAAGGATCTTCTTCNNTNNNNNNNNNNTNNNNNNNNNNAGAATATATTGATGAAGATGAGTTGTTGAATATGCCAAATTTGTTGGATGAAATGGCTAGAGGAATGCAGGTTAGTCCACCAAGGATGAGCTCATTTTCTAATTATTCTTCAGATGATTCGCCTCGCAATTCTGATCATGGAGGAGATAATCTTTGGAGTTACAATTTTTGA 435 0.3678 MAAAAYDVAALALKGPETTLNFPDSIPSYPIPASLSSTDIRAAAEAAAQTRIMKVITPKQEEGQQEQQKPSSSGFEGSSSXXXXXXXXEYIDEDELLNMPNLLDEMARGMQVSPPRMSSFSNYSSDDSPRNSDHGGDNLWSYNF 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74736g00001 144 Gene3D AP2/ERF domain 1 24 IPR036955 GO:0003700|GO:0006355
Trme74736g00001 144 MobiDBLite consensus disorder prediction 114 144 - -
Trme74736g00001 144 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 142 IPR045277 GO:0003700
Trme74736g00001 144 MobiDBLite consensus disorder prediction 53 144 - -
Trme74736g00001 144 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme74736g00001 Trme-Chr74736 203 637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74736g00001 12 142 AP2-EREBP Transcription Factor Family AT5G52020 42.143 1.78e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74736g00001 - - psat:127091780 165.622