Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7470g00001 ATGCCTAGAAAGGGAATGAGAAGCATTTTCTTCCAACCATCCACCTCATCAAAACTCCCACCACCATCCTCACCTCTCCGCACTTTCTCAGACTCCTTAATGGAAGAAAACATCGAAACCGCAGAATCACTTATAACAAAATGGGATTATTCCAAAAAAATCATTACCCCGCTTTTCAGTGGCAACACTCGTTTAGAAGCCAAACAATACCTAAACGCTGTTAAAGGTCTACAATCCGCTATGCAGTACCTTGTCACACGTGATTCCACCTCTAACGCTCTTATCAAAGCTCAATTCTTAATGCAACTTGCAATGAAAACTCTTCAAAAAGAATTTTATCAGATTCTATCATCAAACAGAGAATATTTAGATCCTGAAACCGTTTCTAACCGTTCTTCGGTAGATCGTAGAAGCAGTGTTTCATTTTCTGATTATGAAAGTGAAATCGAAATC 453 0.3885 MPRKGMRSIFFQPSTSSKLPPPSSPLRTFSDSLMEENIETAESLITKWDYSKKIITPLFSGNTRLEAKQYLNAVKGLQSAMQYLVTRDSTSNALIKAQFLMQLAMKTLQKEFYQILSSNREYLDPETVSNRSSVDRRSSVSFSDYESEIEI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7470g00001 151 Gene3D Exocyst complex component Exo70 41 150 - -
Trme7470g00001 151 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 141 IPR004140 GO:0000145|GO:0006887
Trme7470g00001 151 SUPERFAMILY Cullin repeat-like 45 133 IPR016159 -
Trme7470g00001 151 MobiDBLite consensus disorder prediction 9 24 - -
Trme7470g00001 151 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7470g00001 22 126 EXO70 exocyst subunit family AT2G39380 52.252 4.39e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7470g00001 K07195 - gmx:100810579 200.29