Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74654g00001 TCCTTGCTTAATCAAGGACCTACTGCTTTTTCCGGGAATCCCGGACTTTGCGGGTTTCCGTTACGGAACCTTTGTCCAGACCGGATAAAGGTTCCTGATTTTTACCCCGAAAACCCTGATCCGAATCCGAATGCGGTTCGGACCGGGGCGGTTCGTGATGATGGGAGGGAGAGGGGTGGGTTGTTTTTTGTTGTTGGTTTGGTTTTGATTTGTGTTGGGATGGTGGTGGTTTTGATGTCGGTGGTGGTGATCCGGCGGCGACGGAGGAGGTTGAATGATGGGGAAAGGGGATTTGAGAAGGGGAAGATGGAAGGTGAGGTTTTGGGTTGTGGGGAGGAGCAGAAGGGTAGGTTTGTGGTGGTGGATGAAGGATTTGGGTTTGAATTGGAGGATTTGTTGAGGGCTTCTGCTTATGTGGTTGGGAAGAGTAGGAGTGGGATTGTTTATAAGGTTGTTGGTGGCGGAAAAGGGTCGGTTCCGGCGGCGACCGCGGTGGCTGTTCGGCGGTTAAGTGAGGGTGATGATGGAGGTTTAAGGTTCAAGGATTTTGAGTATGAGGTGGAAGCTATTGGAAGGGTAAGACATCCTAATGTTGTGCCTTTGAGAGCTTATTACTATGCTAGTGATGAGAAGCTTCTAATCACTGATTTCATTCGCAATGGAAGCTTGCATACTGCTTTGCATGGTATCATTTCTCACACTTTGGTTCTTACTTTGTTAAATTAA 726 0.4835 SLLNQGPTAFSGNPGLCGFPLRNLCPDRIKVPDFYPENPDPNPNAVRTGAVRDDGRERGGLFFVVGLVLICVGMVVVLMSVVVIRRRRRRLNDGERGFEKGKMEGEVLGCGEEQKGRFVVVDEGFGFELEDLLRASAYVVGKSRSGIVYKVVGGGKGSVPAATAVAVRRLSEGDDGGLRFKDFEYEVEAIGRVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGIISHTLVLTLLN 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74654g00001 241 Pfam Protein tyrosine and serine/threonine kinase 141 228 IPR001245 GO:0004672|GO:0006468
Trme74654g00001 241 Gene3D Phosphorylase Kinase; domain 1 112 217 - -
Trme74654g00001 241 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 229 IPR046959 -
Trme74654g00001 241 ProSiteProfiles Protein kinase domain profile. 134 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme74654g00001 241 SUPERFAMILY Protein kinase-like (PK-like) 139 231 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme74654g00001 Trme-Chr74654 1 726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74654g00001 1 235 Receptor kinase-like Gene Family AT3G57830 52.000 1.19e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme74654g00001 PK_Tyr_Ser-Thr 3.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74654g00001 - - vvo:131595630 328.176