Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme745175g00001 GATCGGAGCTCAAAGCGAAATGGATCAGAAGTTCTATCGTACGGTTCGGTGTCTACGATAGGCACTAGGAAGGAAATGGAGGATGCGGTGAGTGTGGAGATAGGTTTTGCGGTTAAGGATAGTGAGAAGTGTGATTTTTTCGGTGTTTATGACGGTCACGGCGGAGCTCAGGTTGCAGAGGCGTGTAAGGAGAGGTTTCATCAGGTTGTGGCGGAGGAGGTGGAGAGATGTGGGAAGGATGATGA 245 0.502 DRSSKRNGSEVLSYGSVSTIGTRKEMEDAVSVEIGFAVKDSEKCDFFGVYDGHGGAQVAEACKERFHQVVAEEVERCGKDD 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme745175g00001 81 ProSitePatterns PPM-type phosphatase domain signature. 46 54 IPR000222 GO:0043169
Trme745175g00001 81 Gene3D - 8 81 IPR036457 -
Trme745175g00001 81 SUPERFAMILY PP2C-like 11 76 IPR036457 -
Trme745175g00001 81 PANTHER PROTEIN PHOSPHATASE 10 74 IPR015655 GO:0004722|GO:0006470
Trme745175g00001 81 ProSiteProfiles PPM-type phosphatase domain profile. 13 81 IPR001932 -
Trme745175g00001 81 Pfam Protein phosphatase 2C 14 77 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme745175g00001 Trme-Chr745175 2 246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme745175g00001 9 81 PP2C-type Phosphatase Gene Family AT3G11410 46.575 7.22e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme745175g00001 K14497 - gmx:100807235 104.375