Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74456g00001 ATGGAGCATGGAAGCCCCTCCATTAACCACAATCATTTGGCACAATTAAGATCATTCAATTTGCAGTTAGCGAATCAATCTGAAATAAATGAATCTCTAAGGAACAAAGACAACGACGACGACGACAACAACAACATTGGTGTTGAAATTCAGCAACGACATTTACCTCCAACAACTGATTATAATCTGCTTCCCATCACAAAATTGACAAAAATCATGGAGCGTGCTCTTCCACAAGACGCACAAATTTCTGACGATGCTAAGGAATCAATGCAATTGTGTGTGTCTGAATTCGCGAGGATCATCATGAGCGAGGCTAATAAACGAT 328 0.3994 MEHGSPSINHNHLAQLRSFNLQLANQSEINESLRNKDNDDDDNNNIGVEIQQRHLPPTTDYNLLPITKLTKIMERALPQDAQISDDAKESMQLCVSEFARIIMSEANKR 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74456g00001 109 Gene3D Histone, subunit A 55 109 IPR009072 GO:0046982
Trme74456g00001 109 SUPERFAMILY Histone-fold 62 108 IPR009072 GO:0046982
Trme74456g00001 109 Coils Coil 16 36 - -
Trme74456g00001 109 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 64 108 IPR003958 -
Trme74456g00001 109 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 45 109 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74456g00001 1 109 CCAAT-HAP3 Transcription Factor Family AT1G21970 33.333 1.11e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74456g00001 K08065 - cit:102610438 61.6178