Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74437g00001 ATGGACCAAAACGAGCTTAACTCTGGCTCTTCACAGGTTCTCATTACCACTGACTTGGCTCATAGCATTGATGTTCAGCATGTTTATCTGGTGATAAACTATGACCTGCGTATCGAACCGGAAAAATATCTTAACCGCGTTGGTCGAAGGGGGTGTTTTAGAAAAGTGGTTGCTATCAACTATGTAGAAGATCCGATGATGTTGTTCGATATTCAGGAGTTATATGATATGATGGTGGCGGTATTGCCTTATCAAATTGCGGATTTACTCGAATGA 276 0.413 MDQNELNSGSSQVLITTDLAHSIDVQHVYLVINYDLRIEPEKYLNRVGRRGCFRKVVAINYVEDPMMLFDIQELYDMMVAVLPYQIADLLE 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74437g00001 91 Pfam Helicase conserved C-terminal domain 5 51 IPR001650 -
Trme74437g00001 91 Gene3D - 3 88 IPR027417 -
Trme74437g00001 91 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 90 IPR001650 -
Trme74437g00001 91 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 78 IPR027417 -
Trme74437g00001 91 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 4 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74437g00001 1 90 Eukaryotic Initiation Factors Gene Family AT1G72730 56.436 8.24e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74437g00001 K03257 - ini:109186383 99.3673