Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74368g00001 ATGGGTTTGGAAGACATTGAAGATAGTAGAATTGGGAATTGGCATTTGAGAGGCATAAGTAATGGAGAGAAAAGAAGACTTAGCATAGGAATTGAGCTATTAACACAACCTCAAATAATGTTTCTTGATGAACCAACTAGTGGATTGGACAGTGCAGCTGCTTTCTATGTTGTTTCATCTCTTAGAAGAATAGCTCATGATGGAAGAATTGTTATCTTCTCTATTCATCAACCAAGTGATGAAGTTTTCAATCTCTTTGATGATCTCATTATTCTTGCAGGAGGTGAAACTGTTTATTTTGGAGAAATCACCATGGCACTAAAG 324 0.3611 MGLEDIEDSRIGNWHLRGISNGEKRRLSIGIELLTQPQIMFLDEPTSGLDSAAAFYVVSSLRRIAHDGRIVIFSIHQPSDEVFNLFDDLIILAGGETVYFGEITMALK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74368g00001 108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 103 IPR027417 -
Trme74368g00001 108 Pfam ABC transporter 2 47 IPR003439 GO:0005524
Trme74368g00001 108 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 107 - -
Trme74368g00001 108 Gene3D - 1 108 IPR027417 -
Trme74368g00001 108 Pfam ABC-2 type transporter 76 104 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme74368g00001 Trme-Chr74368 454 777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74368g00001 3 79 Calmodulin-binding Proteins AT2G36910 36.364 5.41e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74368g00001 - K05681 gmx:102659519 187.578