Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74294g00001 GTTGGGAGTAACCCTGATGATGCAACCAAGAGAATGAGGCGTCAATCTCGGTCCAAAACCTTTAAGGTTGAGATTAGTTTTGTGGCCAAAATTCCATTGAAAGCAATTACAAATGCAATACAAGGTCAGGAATCTGAGCACTATCAAGAAGCATTAAGAGTTCTCGACATTATACTGAGGCAGAATGCAGCGAAGCAGGGATGTCTCCTTATTCGCCAATCGTTCTTTCATGAAAATCCGAGGAATATTACTAACATTGGTGGTGGTGTTCAAAGTTGTCGCGGTTTCCATTCAAGCTTTAGAGTCACACAAAGAGGTTTATCTCTCAATGTTGATGTGTCGACTACATTACTTGTAAAGCCTGGCCCTCTAGTCGACTTCCTTCTCGAGAACCAGAATGTTCAACAGCCAAACTTCATTGATTGGTCCAAGGTTATATTATATTACTACTCCATTTACAAGTAA 465 0.4065 VGSNPDDATKRMRRQSRSKTFKVEISFVAKIPLKAITNAIQGQESEHYQEALRVLDIILRQNAAKQGCLLIRQSFFHENPRNITNIGGGVQSCRGFHSSFRVTQRGLSLNVDVSTTLLVKPGPLVDFLLENQNVQQPNFIDWSKVILYYYSIYK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74294g00001 154 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 8 136 - -
Trme74294g00001 154 SUPERFAMILY PAZ domain 19 145 IPR036085 GO:0005515
Trme74294g00001 154 Pfam Argonaute linker 1 domain 71 117 IPR014811 -
Trme74294g00001 154 SMART DUF1785_2 69 121 IPR014811 -
Trme74294g00001 154 Pfam N-terminal domain of argonaute 7 59 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme74294g00001 Trme-Chr74294 115 742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74294g00001 17 130 Eukaryotic Initiation Factors Gene Family AT5G43810 35.088 3.92e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74294g00001 K11593 - cit:102615576 216.083