Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme742618g00001 ATGAATCCTCGCATCCGCGCCGCTTATATAGACTGTCTTGAGCTTCTAGACGATTCCGTCGACGCTCTTTCTCGTTCACTTACTTCCGTCGTACCTTCAACTTCCACCGGCGCTGTTAAGCCTCTTACAGCATCCTCAACCGACGATGTACTGACATGGCTGAGCGCCGC 170 0.5294 MNPRIRAAYIDCLELLDDSVDALSRSLTSVVPSTSTGAVKPLTASSTDDVLTWLSAA 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme742618g00001 57 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 57 IPR035513 -
Trme742618g00001 57 Pfam Plant invertase/pectin methylesterase inhibitor 7 57 IPR006501 GO:0004857
Trme742618g00001 57 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 57 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme742618g00001 Trme-Chr742618 1 170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme742618g00001 1 57 Carbohydrate Esterase AT5G53370 54.386 3.41e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme742618g00001 - - mnt:21390237 78.5666