Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74220g00001 AACCACCGTGGTTTGAGGCACTACTGGGGTCTTCGTGTTCGTGGTCAGCATACTAAGACTACTGGTCGTAGGGGAAAGACTGTTGGTGTCTCTAAGAAGCGTTGA 105 0.5048 NHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74220g00001 34 SUPERFAMILY S13-like H2TH domain 2 34 IPR010979 GO:0003676
Trme74220g00001 34 Pfam Ribosomal protein S13/S18 1 24 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Trme74220g00001 34 MobiDBLite consensus disorder prediction 15 34 - -
Trme74220g00001 34 Gene3D 30s ribosomal protein s13, domain 2 1 25 IPR027437 -
Trme74220g00001 34 ProSiteProfiles Ribosomal protein S13 family profile. 1 27 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Trme74220g00001 34 ProSitePatterns Ribosomal protein S13 signature. 3 16 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74220g00001 1 34 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 100.000 6.19e-19 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74220g00001 K02964 - dcr:108200924 70.8626