Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme741g00001 AATGAAAGTTCTGATATCAAGAATATTGTTGAAAATGTCACCCGATTGCTAGATAGGACAGAGTTATTTGTTGCTGAACATCCAGTTGGAGTAGAATCTCGTGTGCAAGCTGCAACTAAGCTATTAAACATCCAAAACTCAGAAGATGTTTTACTTCTTGGGATATGGGGAATGGGAGGCATGGGTAAAACAACCATCGCCAAAGCCATTTACAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTTCTCCTCAATATAAGGGAATTTTGGGAGACAGATTCTAATCAAGTTTCTCTACAGCAACAGATACTCTCTGATGTTTACAAAACAACGAGATTCAAGATACGTGACATTGAATCAGGGAAAAATATATTGAAGCAAAGACTTGCTCAAAATAGGATACTTCTGGTGCTTGATGATGTGAATGATTTGGACCAACTAAAGGCTTTTTTTGGAAGCCGCGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACAAGAGATATCCGCCTTCTTAGGTCATGTGGGGTTGATCAAGTGTATACAATAGAAGAAATGAACAAAAGTGAATCTCTTGAACTTTTTAGTTGGCATGCATTCAAGCAACCATGTCCAACAAAAGATTTTGCTGCACATTCAACAGATGTGATTGCTTATTCTGGGAGTTTGCCACTAGCCCTTCAAGTCCTTGGGTCCTATTTGTCTGACTGCTGTGAAATATCAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATGATCAAGTGCAAACGAAGCTAAAATTAAGCTTTGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCCTTGATATAACCTGTTTCTTTATTGGGGTGGACCAAAACGATGTAATACAAATATTAAATGGGTGCGGATTTTTTGCCGATGTTGGAATTAAAGTTCTTTTAGAACGAAGCCTTCTAACTGTTGACAATAAAAACAAGCTTAGAATGCATGCTTTGTTGAGAGACATGGGAAGGCAAATAATTTATGAGGAATCACCATTTGATCCTGAGCTGCGCAGTAGGTTGTGGCGTCATGCGGAAGTGGTTGATGTATTATCGAAGCATAAGGGAACAGAAGCTGTTAAGGGACTGGCTTTGGAGTTTCCAAGAAAAAATACCGTTTGTTTGAATACCAAAGCATTTAAGAAGATGAATAAACTTAGATTGCTTCAACTTGCTTGGGTGAAGCTTAAGGGAGATTTTAAATATCTTTCTAGAGATCTTAGGTGGCTCTGCTGGCATGGATTTCCAAAAACCTACGCTCCTTCAGAATTTCAGCAAGAAAGTCTAGTTGCCATCGAATTCAAGCATAGTAAGCTCAAACGAATATGGATTAAGAACCAGATGCTAGAGAATCTAACGATTCTTAATCTTAGTCATTCTCTATATTTGACTGAAACCCCAGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGTTTGCCTACGGTCTCCAATAGCATTGGATCTCTCCATAAACTTCTTCTGATAAATTTGACTGACTGCACAGGTCTTCGGAAACTTCCGAGAAGCATCTATAAATTAAAATCTCTAGAAACTTTGATTCTTTCAGGATGTTCCATGATCGACAAATTGGAGGAGGACTTGGTACAGATGGAATCATTGACAAACTTGATTTGTGATAAGACTGCAATAACGAAAGTGCCCTTTTCGATAGTAAGATCAAAAAGCATTGGATATATTTCTCTCTGTGGCTTTGAAGGATTTTCACGTGATGTAATTCCTTCTGTTATTCAATCTTGGATGTCACCAACAAATAATGTGATATCACTAGTTCAACGATCTGCATCCATTACGTCGGTTGTTTCATTGGACCTTCTAAAGCTTAGAAGTTTTTATGTAGAGTGTGGCTCAGATCTGCAACTAACTCAAGGTGTAGCAAGAATTTTGCATGTATTAAAAGCATCAAATTGTCAGAACAGGGAAGCAAGTGCAATTTCAACTACATCACAAATCTCTGATATGTACACTTCTCCTTTAATTGATGATTGCCTTGGTCAATTCCGCACTTCAGAGTCAAAGAATTACCTGAAAACACTCTTAATTCAAATGGGAACAAAATGCCAAGTCTCCAATAGTGCCCAAGACAGTATTTTACAGACTGCAGATGGGACTTGGGATTCATTTTTGCCTCCCTGTGACAAAGAATCCAATTGGTTAACCTTCAGTTGCAAAG 2254 0.3807 NESSDIKNIVENVTRLLDRTELFVAEHPVGVESRVQAATKLLNIQNSEDVLLLGIWGMGGMGKTTIAKAIYNQIGSKFEGRSFLLNIREFWETDSNQVSLQQQILSDVYKTTRFKIRDIESGKNILKQRLAQNRILLVLDDVNDLDQLKAFFGSREWFGPGSRIIITTRDIRLLRSCGVDQVYTIEEMNKSESLELFSWHAFKQPCPTKDFAAHSTDVIAYSGSLPLALQVLGSYLSDCCEISEWQKVLEKLKCIPHDQVQTKLKLSFDGLKDVTEKQIFLDITCFFIGVDQNDVIQILNGCGFFADVGIKVLLERSLLTVDNKNKLRMHALLRDMGRQIIYEESPFDPELRSRLWRHAEVVDVLSKHKGTEAVKGLALEFPRKNTVCLNTKAFKKMNKLRLLQLAWVKLKGDFKYLSRDLRWLCWHGFPKTYAPSEFQQESLVAIEFKHSKLKRIWIKNQMLENLTILNLSHSLYLTETPDFSYLPNLEKLVLKDCPSLPTVSNSIGSLHKLLLINLTDCTGLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLVQMESLTNLICDKTAITKVPFSIVRSKSIGYISLCGFEGFSRDVIPSVIQSWMSPTNNVISLVQRSASITSVVSLDLLKLRSFYVECGSDLQLTQGVARILHVLKASNCQNREASAISTTSQISDMYTSPLIDDCLGQFRTSESKNYLKTLLIQMGTKCQVSNSAQDSILQTADGTWDSFLPPCDKESNWLTFSCK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme741g00001 751 Pfam NB-ARC domain 34 254 IPR002182 GO:0043531
Trme741g00001 751 Gene3D - 187 272 IPR042197 -
Trme741g00001 751 SUPERFAMILY "Winged helix" DNA-binding domain 259 365 IPR036390 -
Trme741g00001 751 PRINTS Disease resistance protein signature 222 236 - -
Trme741g00001 751 PRINTS Disease resistance protein signature 129 143 - -
Trme741g00001 751 PRINTS Disease resistance protein signature 532 548 - -
Trme741g00001 751 PRINTS Disease resistance protein signature 52 67 - -
Trme741g00001 751 Gene3D - 12 182 IPR027417 -
Trme741g00001 751 SUPERFAMILY L domain-like 379 668 - -
Trme741g00001 751 Gene3D Ribonuclease Inhibitor 372 694 IPR032675 -
Trme741g00001 751 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 667 IPR044974 GO:0006952
Trme741g00001 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 283 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme741g00001 Trme-Chr741 40 3295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme741g00001 29 549 WRKY Transcription Factor Family AT5G45050 33.090 1.04e-76 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme741g00001 - - mtr:11411578 1175.61