Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme74097g00001 ATGTCCTATGCCAATAAGTTAGATGAATGTGAGGCAAGGAAGCTATTCCAGCAACTTATTGATGCTGTCGACTACTGCCATAATAAGGGAGTTTATCATCGCGATTTAAAGCCTGAAAATTTGCTTATTGACAGCAAGGGAAACCTAAAAGTTTCTGATTTTGGATTAAGTGCATTGAATAAGTCTGATGATGTTTTAAACACAAGGTGTGGATCCCCGTGCTACGTGGCTCCCGAGGTAAGATTGAGTGGAGGAGGAGAGTGTTTGGGAGTCCGAGGGAGCACTTGTGAGCGAAAACATGCTAAAGTGCTGATGAACAAAGGGTATGATGGAGCAGTTGTTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAGTTACTTGCTGGTTTTCTACCATTTGATGACCAAAACTTGATGGGTTTATACCGTAAG 432 0.4213 MSYANKLDECEARKLFQQLIDAVDYCHNKGVYHRDLKPENLLIDSKGNLKVSDFGLSALNKSDDVLNTRCGSPCYVAPEVRLSGGGECLGVRGSTCERKHAKVLMNKGYDGAVVDVWSCGVILFELLAGFLPFDDQNLMGLYRK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme74097g00001 144 Gene3D Transferase(Phosphotransferase) domain 1 1 144 - -
Trme74097g00001 144 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 144 - -
Trme74097g00001 144 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme74097g00001 144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Trme74097g00001 144 Pfam Protein kinase domain 5 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme74097g00001 144 SUPERFAMILY Protein kinase-like (PK-like) 5 143 IPR011009 -
Trme74097g00001 144 SMART serkin_6 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme74097g00001 Trme-Chr74097 11 777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme74097g00001 5 144 CBL-interacting serine-threonine protein kinases AT5G57630 65.000 7.33e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme74097g00001 Pkinase 3.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme74097g00001 - - tpra:123908220 258.07